Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEZ79650.1 | EEZ79652.1 | Sup05_0949 | Sup05_0951 | ABC-type transporter. | Hypothetical protein. | 0.990 |
EEZ79650.1 | EEZ79653.1 | Sup05_0949 | Sup05_0952 | ABC-type transporter. | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 0.714 |
EEZ79650.1 | EEZ80557.1 | Sup05_0949 | Sup05_0026 | ABC-type transporter. | Sugar phosphate isomerase. | 0.498 |
EEZ79650.1 | lptA | Sup05_0949 | Sup05_0950 | ABC-type transporter. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.936 |
EEZ79652.1 | EEZ79650.1 | Sup05_0951 | Sup05_0949 | Hypothetical protein. | ABC-type transporter. | 0.990 |
EEZ79652.1 | EEZ79653.1 | Sup05_0951 | Sup05_0952 | Hypothetical protein. | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 0.807 |
EEZ79652.1 | EEZ79654.1 | Sup05_0951 | Sup05_0953 | Hypothetical protein. | Transposase. | 0.416 |
EEZ79652.1 | lptA | Sup05_0951 | Sup05_0950 | Hypothetical protein. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.991 |
EEZ79653.1 | EEZ79650.1 | Sup05_0952 | Sup05_0949 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | ABC-type transporter. | 0.714 |
EEZ79653.1 | EEZ79652.1 | Sup05_0952 | Sup05_0951 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Hypothetical protein. | 0.807 |
EEZ79653.1 | EEZ79654.1 | Sup05_0952 | Sup05_0953 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Transposase. | 0.436 |
EEZ79653.1 | EEZ80312.1 | Sup05_0952 | Sup05_0732 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | CMP-2-keto-3-deoxyoctulosonic acid synthetase. | 0.541 |
EEZ79653.1 | EEZ80313.1 | Sup05_0952 | Sup05_0733 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | CMP-2-keto-3-deoxyoctulosonic acid synthetase. | 0.672 |
EEZ79653.1 | EEZ80332.1 | Sup05_0952 | Sup05_0753 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase. | 0.813 |
EEZ79653.1 | EEZ80379.1 | Sup05_0952 | Sup05_0801 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.447 |
EEZ79653.1 | EEZ80557.1 | Sup05_0952 | Sup05_0026 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Sugar phosphate isomerase. | 0.945 |
EEZ79653.1 | lptA | Sup05_0952 | Sup05_0950 | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.751 |
EEZ79654.1 | EEZ79652.1 | Sup05_0953 | Sup05_0951 | Transposase. | Hypothetical protein. | 0.416 |
EEZ79654.1 | EEZ79653.1 | Sup05_0953 | Sup05_0952 | Transposase. | Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 0.436 |
EEZ79654.1 | lptA | Sup05_0953 | Sup05_0950 | Transposase. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.416 |
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