Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEZ79627.1 | EEZ79628.1 | Sup05_1007 | Sup05_1008 | Riboflavin synthase alpha chain. | Hypothetical protein. | 0.664 |
EEZ79627.1 | EEZ79629.1 | Sup05_1007 | Sup05_1009 | Riboflavin synthase alpha chain. | ATPase component of ABC transporter. | 0.659 |
EEZ79627.1 | EEZ79630.1 | Sup05_1007 | Sup05_1010 | Riboflavin synthase alpha chain. | Cell division protein FtsW; Belongs to the SEDS family. | 0.464 |
EEZ79627.1 | nusB | Sup05_1007 | Sup05_1004 | Riboflavin synthase alpha chain. | Transcription termination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.802 |
EEZ79627.1 | ribB | Sup05_1007 | Sup05_1006 | Riboflavin synthase alpha chain. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.999 |
EEZ79627.1 | ribH | Sup05_1007 | Sup05_1005 | Riboflavin synthase alpha chain. | Riboflavin synthase beta-chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.999 |
EEZ79628.1 | EEZ79627.1 | Sup05_1008 | Sup05_1007 | Hypothetical protein. | Riboflavin synthase alpha chain. | 0.664 |
EEZ79628.1 | EEZ79629.1 | Sup05_1008 | Sup05_1009 | Hypothetical protein. | ATPase component of ABC transporter. | 0.762 |
EEZ79628.1 | EEZ79630.1 | Sup05_1008 | Sup05_1010 | Hypothetical protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.533 |
EEZ79628.1 | nusB | Sup05_1008 | Sup05_1004 | Hypothetical protein. | Transcription termination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.638 |
EEZ79628.1 | ribB | Sup05_1008 | Sup05_1006 | Hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.710 |
EEZ79628.1 | ribH | Sup05_1008 | Sup05_1005 | Hypothetical protein. | Riboflavin synthase beta-chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.644 |
EEZ79628.1 | rnpA | Sup05_1008 | Sup05_0699 | Hypothetical protein. | RNase P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.674 |
EEZ79629.1 | EEZ79627.1 | Sup05_1009 | Sup05_1007 | ATPase component of ABC transporter. | Riboflavin synthase alpha chain. | 0.659 |
EEZ79629.1 | EEZ79628.1 | Sup05_1009 | Sup05_1008 | ATPase component of ABC transporter. | Hypothetical protein. | 0.762 |
EEZ79629.1 | EEZ79630.1 | Sup05_1009 | Sup05_1010 | ATPase component of ABC transporter. | Cell division protein FtsW; Belongs to the SEDS family. | 0.534 |
EEZ79629.1 | nusB | Sup05_1009 | Sup05_1004 | ATPase component of ABC transporter. | Transcription termination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.633 |
EEZ79629.1 | ribB | Sup05_1009 | Sup05_1006 | ATPase component of ABC transporter. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.697 |
EEZ79629.1 | ribH | Sup05_1009 | Sup05_1005 | ATPase component of ABC transporter. | Riboflavin synthase beta-chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.633 |
EEZ79630.1 | EEZ79627.1 | Sup05_1010 | Sup05_1007 | Cell division protein FtsW; Belongs to the SEDS family. | Riboflavin synthase alpha chain. | 0.464 |
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