STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN55957.1Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. (366 aa)    
Predicted Functional Partners:
SFN90850.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.753
SFO66001.1
Hpt domain-containing protein.
  
     0.743
SFO66174.1
Flagellin FlgL.
  
     0.702
SFN90905.1
Hypothetical protein.
 
     0.679
SFO80339.1
PilZ domain-containing protein.
  
     0.675
SFN92483.1
Pilus assembly protein CpaD.
  
     0.635
SFP07909.1
Transposase.
  
     0.586
SFN92626.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.572
SFO80653.1
Uncharacterized conserved protein, DUF2336 family.
  
     0.565
SFO49838.1
Hypothetical protein.
 
     0.559
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.