STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN57565.1Signal transduction histidine kinase. (468 aa)    
Predicted Functional Partners:
SFN57540.1
Two-component system, OmpR family, response regulator.
 0.978
SFO51750.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.939
SFO60887.1
CheR methyltransferase, all-alpha domain.
   
 0.913
SFO60929.1
Signal transduction histidine kinase.
 
 0.904
SFN78540.1
Two-component system, sensor histidine kinase RpfC.
  
 0.898
SFN96309.1
Na+/proline symporter.
   
 0.891
SFO39711.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 0.882
SFN87967.1
PAS domain S-box-containing protein.
 
 0.833
SFO51842.1
Cell cycle transcriptional regulator CtrA.
 
 0.778
SFO14813.1
PAS domain S-box-containing protein.
   
 0.764
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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