STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN61969.1Ferredoxin. (96 aa)    
Predicted Functional Partners:
SFO63165.1
Acyl transferase domain-containing protein.
   
 0.976
SFN62043.1
Nitrogen fixation protein NifQ.
 
 0.975
SFO60812.1
Formate dehydrogenase beta subunit.
  
 0.971
SFN61903.1
4Fe-4S dicluster domain-containing protein.
 
 
 0.939
SFN61936.1
Flavorubredoxin.
 
  
 0.931
SFO26457.1
Cysteine desulfurase.
  
 0.928
SFN84735.1
NAD(P)H-flavin reductase.
  
 0.907
SFO74694.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
   
 0.903
SFN62007.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
     0.899
SFO51292.1
Cytochrome P450.
  
 0.894
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.