SFN65511.1 protein (Cohaesibacter marisflavi)

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Known Interactions

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Predicted Interactions

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Score

SFN65511.1

Peptide/nickel transport system substrate-binding protein. (529 aa)

Predicted Functional Partners:

SFO69341.1

0.935

SFO69298.1

0.853

SFO69317.1

0.848

SFN63797.1

0.828

SFN84571.1

0.805

SFN84950.1

0.792

SFO98714.1

0.688

SFO69366.1

0.674

SFN84661.1

0.598

SFO51206.1

0.539

Your Current Organism:

Cohaesibacter marisflavi

NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFN63797.1	SFN65511.1	SAMN04488056_101550	SAMN04488056_101600	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	Peptide/nickel transport system substrate-binding protein.	0.828
SFN63797.1	SFO51206.1	SAMN04488056_101550	SAMN04488056_107103	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	Peptide/nickel transport system permease protein.	0.929
SFN63797.1	SFO69298.1	SAMN04488056_101550	SAMN04488056_11126	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	Peptide/nickel transport system permease protein.	0.929
SFN63797.1	SFO69317.1	SAMN04488056_101550	SAMN04488056_11127	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	Peptide/nickel transport system permease protein.	0.491
SFN63797.1	SFO69341.1	SAMN04488056_101550	SAMN04488056_11128	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	0.965
SFN65511.1	SFN63797.1	SAMN04488056_101600	SAMN04488056_101550	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.828
SFN65511.1	SFN84571.1	SAMN04488056_101600	SAMN04488056_102186	Peptide/nickel transport system substrate-binding protein.	4Fe-4S single cluster domain of Ferredoxin I.	0.805
SFN65511.1	SFN84661.1	SAMN04488056_101600	SAMN04488056_102188	Peptide/nickel transport system substrate-binding protein.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha.	0.598
SFN65511.1	SFN84950.1	SAMN04488056_101600	SAMN04488056_102196	Peptide/nickel transport system substrate-binding protein.	Pyruvate-ferredoxin/flavodoxin oxidoreductase.	0.792
SFN65511.1	SFO51206.1	SAMN04488056_101600	SAMN04488056_107103	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system permease protein.	0.539
SFN65511.1	SFO69298.1	SAMN04488056_101600	SAMN04488056_11126	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system permease protein.	0.853
SFN65511.1	SFO69317.1	SAMN04488056_101600	SAMN04488056_11127	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system permease protein.	0.848
SFN65511.1	SFO69341.1	SAMN04488056_101600	SAMN04488056_11128	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	0.935
SFN65511.1	SFO69366.1	SAMN04488056_101600	SAMN04488056_11129	Peptide/nickel transport system substrate-binding protein.	Hypothetical protein.	0.674
SFN65511.1	SFO98714.1	SAMN04488056_101600	SAMN04488056_11759	Peptide/nickel transport system substrate-binding protein.	Ferredoxin.	0.688
SFN84571.1	SFN65511.1	SAMN04488056_102186	SAMN04488056_101600	4Fe-4S single cluster domain of Ferredoxin I.	Peptide/nickel transport system substrate-binding protein.	0.805
SFN84571.1	SFN84661.1	SAMN04488056_102186	SAMN04488056_102188	4Fe-4S single cluster domain of Ferredoxin I.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha.	0.999
SFN84571.1	SFN84950.1	SAMN04488056_102186	SAMN04488056_102196	4Fe-4S single cluster domain of Ferredoxin I.	Pyruvate-ferredoxin/flavodoxin oxidoreductase.	0.999
SFN84571.1	SFO98714.1	SAMN04488056_102186	SAMN04488056_11759	4Fe-4S single cluster domain of Ferredoxin I.	Ferredoxin.	0.965
SFN84661.1	SFN65511.1	SAMN04488056_102188	SAMN04488056_101600	2-oxoglutarate ferredoxin oxidoreductase subunit alpha.	Peptide/nickel transport system substrate-binding protein.	0.598

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

148

PPI enrichment p-value:

0.633

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006633

Fatty acid biosynthetic process

8 of 68

1.92

4.25

1.36e-11

GO:0019752

Carboxylic acid metabolic process

9 of 566

1.05

1.24

4.41e-07

GO:0044249

Cellular biosynthetic process

9 of 1106

0.76

0.68

0.00010

GO:1901576

Organic substance biosynthetic process

9 of 1134

0.75

0.67

0.00012

GO:0044238

Primary metabolic process

10 of 2411

0.47

0.36

0.0052

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0031177

Phosphopantetheine binding

8 of 27

2.32

6.41

9.88e-15

GO:0004315

3-oxoacyl-[acyl-carrier-protein] synthase activity

8 of 28

2.31

6.37

9.88e-15

GO:0019842

Vitamin binding

9 of 101

1.8

4.31

1.23e-13

GO:0003824

Catalytic activity

11 of 3751

0.32

0.25

0.0258

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1386

Phosphopantetheine binding, and Condensation domain

9 of 27

2.37

7.5

2.99e-17

CL:1389

Phosphopantetheine binding, and Condensation domain

7 of 21

2.37

6.07

1.58e-13

CL:1366

Mixed, incl. Phosphopantetheine, and Fatty acid biosynthesis

10 of 132

1.73

4.23

7.68e-15

CL:1391

Phosphopantetheine binding

4 of 12

2.37

3.25

4.69e-07

CL:1418

Erythronolide synthase docking domain, and Phosphopantetheine attachment site

2 of 5

2.45

1.29

0.0043

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00660

C5-Branched dibasic acid metabolism

2 of 16

1.95

0.74

0.0405

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0034081

Polyketide synthase complex

8 of 26

2.34

6.65

3.01e-15

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0596

Phosphopantetheine

9 of 54

2.07

5.9

1.03e-15

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF16197

Ketoacyl-synthetase C-terminal extension

4 of 6

2.67

3.42

3.96e-07

PF00550

Phosphopantetheine attachment site

5 of 33

2.03

2.98

4.18e-07

PF02801

Beta-ketoacyl synthase, C-terminal domain

3 of 6

2.55

2.3

5.14e-05

PF00109

Beta-ketoacyl synthase, N-terminal domain

3 of 11

2.29

1.98

0.00017

PF14765

Polyketide synthase dehydratase

2 of 2

2.85

1.51

0.0018

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00827

Acyl transferase domain in polyketide synthase (PKS) enzymes.

6 of 10

2.63

5.97

2.19e-12

SM00822

This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.

6 of 10

2.63

5.97

2.19e-12

SM00823

Phosphopantetheine attachment site

4 of 13

2.34

3.31

3.12e-07

SM00825

Beta-ketoacyl synthase

3 of 6

2.55

2.71

8.08e-06

SM00826

PKS_DH

2 of 6

2.37

1.46

0.0019

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