STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN68103.1Threonine dehydratase. (415 aa)    
Predicted Functional Partners:
SFO65674.1
Acetolactate synthase, small subunit.
  
 
 0.966
SFO13107.1
Threonine synthase.
  
 
 0.929
SFO65661.1
Acetolactate synthase, large subunit.
 
 0.917
SFN84571.1
4Fe-4S single cluster domain of Ferredoxin I.
    
 0.914
SFN84950.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.911
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 
 0.868
SFO64953.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 0.856
SFO75521.1
Homoserine dehydrogenase.
  
 
 0.823
SFO08058.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
  
 0.821
SFO62263.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
  
 0.821
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.