STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN83721.1Chemotaxis protein MotC. (483 aa)    
Predicted Functional Partners:
SFO88435.1
LVIVD repeat-containing protein.
  
 0.887
SFN83759.1
Chemotaxis protein MotB.
    
 0.847
SFN83832.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.803
SFN83686.1
Hook-length control protein FliK.
     
 0.799
SFN83648.1
Transglycosylase SLT domain-containing protein.
       0.797
SFN83789.1
Hypothetical protein.
       0.773
SFO71263.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.770
SFN90999.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.766
SFO63165.1
Acyl transferase domain-containing protein.
  
 
 0.752
SFO80068.1
Subtilase family protein.
  
 0.747
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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