STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN87032.14-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (336 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.941
SFN89736.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
  
  0.850
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.846
SFN86983.1
Uncharacterized conserved protein YgbK, DUF1537 family.
      0.780
SFN84571.1
4Fe-4S single cluster domain of Ferredoxin I.
  
 
 0.760
SFN84950.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.744
SFN53515.1
Citrate lyase subunit alpha / citrate CoA-transferase.
   
    0.742
SFN86943.1
Predicted neuraminidase (sialidase).
 
     0.741
SFN80271.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.739
SFN59278.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.729
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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