STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN81311.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (563 aa)    
Predicted Functional Partners:
SFO60929.1
Signal transduction histidine kinase.
 0.975
SFO39711.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.968
SFN87967.1
PAS domain S-box-containing protein.
 
 0.966
SFN96309.1
Na+/proline symporter.
 
 0.961
SFN78540.1
Two-component system, sensor histidine kinase RpfC.
 
 0.931
SFO66632.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 
0.927
SFO61047.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.910
SFO90043.1
Hypothetical protein.
  
  0.906
SFN58575.1
Signal transduction histidine kinase.
 
 0.901
SFN81284.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
 0.899
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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