STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO10089.1Cell wall hydrolase CwlJ, involved in spore germination. (551 aa)    
Predicted Functional Partners:
SFO11302.1
Hypothetical protein.
  
     0.613
SFO51691.1
Hypothetical protein.
  
     0.607
SFO70273.1
Protein of unknown function.
  
     0.524
SFO30423.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
     0.469
SFN91397.1
Global cell cycle regulator GcrA.
  
   
 0.458
SFO52053.1
Protein of unknown function.
  
     0.453
SFO60678.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
     0.453
SFO51727.1
Histidine phosphotransferase ChpT.
  
     0.442
SFN99385.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.429
SFO44919.1
Putative peptidoglycan binding domain-containing protein.
     
 0.420
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.