STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO10811.1Methyltransferase domain-containing protein. (208 aa)    
Predicted Functional Partners:
SFO56468.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 0.715
SFO69568.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 0.715
SFN64897.1
Cobaltochelatase CobN.
  
 
 0.711
SFO63328.1
Sulfate adenylyltransferase, large subunit.
    
 0.709
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.709
cysC-2
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.709
SFO76768.1
Sarcosine oxidase subunit alpha.
  
 
 0.699
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.685
SFO64901.1
Transcriptional regulator, ArsR family.
   
 0.681
SFO64953.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.618
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.