STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO26967.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
SFO26994.1
NADH:ubiquinone oxidoreductase subunit.
 
     0.773
SFO80596.1
Hypothetical protein.
  
     0.685
SFN68691.1
Beta-barrel assembly machine subunit BamE.
  
     0.684
SFO61540.1
Cell division transport system permease protein.
  
     0.651
SFO51727.1
Histidine phosphotransferase ChpT.
  
     0.614
SFO36133.1
HemY protein.
  
     0.588
SFO29055.1
Hypothetical protein.
  
     0.579
SFO50181.1
Regulator of CtrA degradation.
  
     0.566
SFO37259.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.565
SFO36907.1
LPS-assembly lipoprotein.
  
     0.556
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.