STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO31412.1Lsr operon transcriptional repressor. (323 aa)    
Predicted Functional Partners:
SFO31436.1
Autoinducer 2 (AI-2) kinase.
 
   
 0.935
SFO31460.1
Cupin domain protein.
 
     0.828
SFO31387.1
Putative autoinducer-2 (AI-2) aldolase.
 
  
 0.823
SFO17854.1
Dihydroxyacetone kinase, N-terminal domain.
  
  0.822
SFO31287.1
AI-2 transport system substrate-binding protein.
 
    0.775
SFO31261.1
Autoinducer 2-degrading protein.
 
  
 0.738
SFN64555.1
Dihydroxyacetone kinase DhaK subunit.
  
  0.664
SFO36036.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.530
SFN88029.1
Phosphocarrier protein FPr.
  
  
 0.482
SFO31311.1
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.476
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.