STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO45092.1Phage tail tube protein FII. (172 aa)    
Predicted Functional Partners:
SFO45112.1
Phage tail sheath protein FI.
       0.757
SFO45069.1
Hypothetical protein.
       0.580
SFO45135.1
Hypothetical protein.
       0.507
SFO45155.1
Hypothetical protein.
       0.491
SFO45175.1
Hypothetical protein.
       0.451
SFO45199.1
Hypothetical protein.
       0.443
SFO45226.1
Phage tail protein, P2 protein I family.
       0.430
SFO45245.1
Phage-related baseplate assembly protein.
       0.430
SFO45279.1
Hypothetical protein.
       0.404
SFO45299.1
Hypothetical protein.
       0.404
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.