STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO45428.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
SFO45393.1
Phage prohead protease, HK97 family.
       0.773
SFO45413.1
Phage portal protein, lambda family.
       0.773
SFO45447.1
Phage terminase, large subunit GpA.
       0.773
SFO45469.1
Winged helix-turn-helix DNA-binding.
       0.741
SFO45374.1
Predicted phage recombinase, RecA/RadA family.
       0.559
SFO45317.1
Phage P2 baseplate assembly protein gpV.
       0.523
SFO45334.1
Hypothetical protein.
       0.523
SFO45354.1
Hypothetical protein.
       0.523
SFO45279.1
Hypothetical protein.
       0.513
SFO45299.1
Hypothetical protein.
       0.513
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.