STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO42830.1YhcH/YjgK/YiaL family protein. (158 aa)    
Predicted Functional Partners:
SFN81915.1
Protease FtsH subunit HflK; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.896
SFN52618.1
Beta-mannosidase.
   
 0.880
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.556
SFO42847.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.528
SFO52646.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 
 0.519
SFO93925.1
N-acetylglucosamine kinase.
  
 
 0.519
SFP01773.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
  0.494
SFO42864.1
2-deoxy-D-gluconate 3-dehydrogenase.
       0.463
SFO42882.1
Threonine dehydrogenase.
       0.432
SFN79164.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 
 0.427
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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