STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO58274.1Glycine betaine/proline transport system ATP-binding protein. (346 aa)    
Predicted Functional Partners:
SFO58294.1
Glycine betaine/proline transport system permease protein.
 0.999
SFO58317.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.999
SFN65634.1
Glycine betaine/proline transport system permease protein.
 0.982
SFN79974.1
Glycine betaine/proline transport system permease protein.
 0.982
SFO88047.1
Glycine betaine/proline transport system permease protein.
 0.982
SFP01973.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.982
SFN65667.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.981
SFN79944.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.971
SFO88082.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.950
SFO69191.1
ABC-2 type transport system ATP-binding protein.
 
    
0.893
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.