Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO30784.1 | SFO30861.1 | SAMN04488056_104348 | SAMN04488056_104351 | TonB family C-terminal domain-containing protein. | Biopolymer transport protein ExbB. | 0.979 |
SFO30784.1 | SFO55944.1 | SAMN04488056_104348 | SAMN04488056_10867 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbB. | 0.925 |
SFO30784.1 | SFO55961.1 | SAMN04488056_104348 | SAMN04488056_10868 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbD. | 0.953 |
SFO30784.1 | SFO55980.1 | SAMN04488056_104348 | SAMN04488056_10869 | TonB family C-terminal domain-containing protein. | Biopolymer transport protein ExbD. | 0.946 |
SFO30784.1 | SFP05999.1 | SAMN04488056_104348 | SAMN04488056_12014 | TonB family C-terminal domain-containing protein. | Iron complex outermembrane recepter protein. | 0.952 |
SFO30784.1 | tolQ | SAMN04488056_104348 | SAMN04488056_10773 | TonB family C-terminal domain-containing protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.902 |
SFO30861.1 | SFO30784.1 | SAMN04488056_104351 | SAMN04488056_104348 | Biopolymer transport protein ExbB. | TonB family C-terminal domain-containing protein. | 0.979 |
SFO30861.1 | SFO50696.1 | SAMN04488056_104351 | SAMN04488056_10775 | Biopolymer transport protein ExbB. | Hypothetical protein. | 0.884 |
SFO30861.1 | SFO55961.1 | SAMN04488056_104351 | SAMN04488056_10868 | Biopolymer transport protein ExbB. | Outer membrane transport energization protein ExbD. | 0.974 |
SFO30861.1 | SFO55980.1 | SAMN04488056_104351 | SAMN04488056_10869 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.966 |
SFO30861.1 | SFO56000.1 | SAMN04488056_104351 | SAMN04488056_10870 | Biopolymer transport protein ExbB. | Protein TonB. | 0.956 |
SFO30861.1 | SFP05999.1 | SAMN04488056_104351 | SAMN04488056_12014 | Biopolymer transport protein ExbB. | Iron complex outermembrane recepter protein. | 0.532 |
SFO30861.1 | ribB | SAMN04488056_104351 | SAMN04488056_103107 | Biopolymer transport protein ExbB. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.485 |
SFO30861.1 | tolQ | SAMN04488056_104351 | SAMN04488056_10773 | Biopolymer transport protein ExbB. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.410 |
SFO50696.1 | SFO30861.1 | SAMN04488056_10775 | SAMN04488056_104351 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.884 |
SFO50696.1 | SFO55944.1 | SAMN04488056_10775 | SAMN04488056_10867 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.884 |
SFO50696.1 | SFO55961.1 | SAMN04488056_10775 | SAMN04488056_10868 | Hypothetical protein. | Outer membrane transport energization protein ExbD. | 0.921 |
SFO50696.1 | SFO55980.1 | SAMN04488056_10775 | SAMN04488056_10869 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.893 |
SFO50696.1 | SFP05999.1 | SAMN04488056_10775 | SAMN04488056_12014 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.946 |
SFO50696.1 | tolQ | SAMN04488056_10775 | SAMN04488056_10773 | Hypothetical protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.974 |
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