STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO56172.1Glucose/mannose transport system substrate-binding protein. (416 aa)    
Predicted Functional Partners:
SFO56217.1
Glucose/mannose transport system permease protein.
 
  0.997
SFO56195.1
Glucose/mannose transport system permease protein.
 
  0.971
SFP14492.1
Glucose/mannose transport system permease protein.
 
 0.962
SFP14454.1
Glucose ABC transporter membrane protein/mannose ABC transporter membrane protein.
 
  0.948
SFO56239.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.800
SFN53215.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.617
SFO93745.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.616
SFO55779.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.613
SFO93770.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.591
SFO76023.1
Sorbitol/mannitol transport system permease protein.
  
 0.590
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.