STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO62757.1Formiminoglutamase. (269 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
  
 0.992
SFO62707.1
Formimidoylglutamate deiminase.
 
 
 0.975
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.935
hutH
Histidine ammonia-lyase.
 
  
 0.933
SFO62692.1
Transcriptional regulator, GntR family.
 
 
 0.905
SFN50427.1
GntR family transcriptional regulator, histidine utilization repressor.
 
 
 0.737
SFO75426.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.734
SFO43757.1
N-formylglutamate amidohydrolase.
  
  
 
0.720
SFO37767.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.692
SFN48039.1
Tetrathionate reductase subunit B.
    
  0.618
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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