Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN54486.1 | SFN84571.1 | SAMN04488056_101246 | SAMN04488056_102186 | FAD/FMN-containing dehydrogenase. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.944 |
SFN54486.1 | SFN84950.1 | SAMN04488056_101246 | SAMN04488056_102196 | FAD/FMN-containing dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.943 |
SFN54486.1 | SFO23122.1 | SAMN04488056_101246 | SAMN04488056_10438 | FAD/FMN-containing dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.831 |
SFN54486.1 | SFO52667.1 | SAMN04488056_101246 | SAMN04488056_107183 | FAD/FMN-containing dehydrogenase. | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | 0.807 |
SFN54486.1 | SFO61958.1 | SAMN04488056_101246 | SAMN04488056_10995 | FAD/FMN-containing dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.690 |
SFN54486.1 | SFO63165.1 | SAMN04488056_101246 | SAMN04488056_109169 | FAD/FMN-containing dehydrogenase. | Acyl transferase domain-containing protein. | 0.908 |
SFN54486.1 | SFO75426.1 | SAMN04488056_101246 | SAMN04488056_11252 | FAD/FMN-containing dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.931 |
SFN54486.1 | SFO81851.1 | SAMN04488056_101246 | SAMN04488056_113103 | FAD/FMN-containing dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.550 |
SFN84571.1 | SFN54486.1 | SAMN04488056_102186 | SAMN04488056_101246 | 4Fe-4S single cluster domain of Ferredoxin I. | FAD/FMN-containing dehydrogenase. | 0.944 |
SFN84571.1 | SFN84950.1 | SAMN04488056_102186 | SAMN04488056_102196 | 4Fe-4S single cluster domain of Ferredoxin I. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SFN84571.1 | SFN88068.1 | SAMN04488056_102186 | SAMN04488056_102279 | 4Fe-4S single cluster domain of Ferredoxin I. | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.493 |
SFN84571.1 | SFO23122.1 | SAMN04488056_102186 | SAMN04488056_10438 | 4Fe-4S single cluster domain of Ferredoxin I. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.926 |
SFN84571.1 | SFO28172.1 | SAMN04488056_102186 | SAMN04488056_104241 | 4Fe-4S single cluster domain of Ferredoxin I. | [Acyl-carrier-protein] S-malonyltransferase. | 0.749 |
SFN84571.1 | SFO52667.1 | SAMN04488056_102186 | SAMN04488056_107183 | 4Fe-4S single cluster domain of Ferredoxin I. | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | 0.738 |
SFN84571.1 | SFO61958.1 | SAMN04488056_102186 | SAMN04488056_10995 | 4Fe-4S single cluster domain of Ferredoxin I. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.747 |
SFN84571.1 | SFO63165.1 | SAMN04488056_102186 | SAMN04488056_109169 | 4Fe-4S single cluster domain of Ferredoxin I. | Acyl transferase domain-containing protein. | 0.911 |
SFN84571.1 | SFO75426.1 | SAMN04488056_102186 | SAMN04488056_11252 | 4Fe-4S single cluster domain of Ferredoxin I. | Glutamate synthase (NADPH/NADH) large chain. | 0.952 |
SFN84571.1 | SFO81851.1 | SAMN04488056_102186 | SAMN04488056_113103 | 4Fe-4S single cluster domain of Ferredoxin I. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.587 |
SFN84950.1 | SFN54486.1 | SAMN04488056_102196 | SAMN04488056_101246 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | FAD/FMN-containing dehydrogenase. | 0.943 |
SFN84950.1 | SFN84571.1 | SAMN04488056_102196 | SAMN04488056_102186 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.999 |
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