STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO64992.1Extensin-like protein C-terminus. (243 aa)    
Predicted Functional Partners:
SFO64973.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit.
       0.562
SFO49518.1
ABC-type uncharacterized transport system, substrate-binding protein.
  
     0.532
SFN99385.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.467
SFO80489.1
NifU homolog involved in Fe-S cluster formation.
  
     0.465
SFO65008.1
DnaJ like chaperone protein.
       0.433
SFO37876.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.420
SFO66068.1
Putative membrane protein.
  
     0.420
SFO61540.1
Cell division transport system permease protein.
  
     0.416
SFO70273.1
Protein of unknown function.
  
     0.414
SFO67229.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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