STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO75754.15-carboxymethyl-2-hydroxymuconate isomerase. (129 aa)    
Predicted Functional Partners:
SFO75835.1
2-oxohept-3-enedioate hydratase.
 
 
 0.985
SFO75921.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.980
SFO75821.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
 
 0.952
SFO75773.1
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.945
SFO75850.1
2,4-dihydroxyhept-2-enedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.899
SFO75739.1
Homoprotocatechuate degradation operon regulator, HpaR.
 
   
 0.897
SFO75789.1
Catechol 2,3-dioxygenase.
 
     0.892
SFN88212.1
2-keto-4-pentenoate hydratase.
  
 
 0.822
SFO15025.1
5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.794
SFO17718.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.774
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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