Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN53515.1 | SFN80271.1 | SAMN04488056_101212 | SAMN04488056_10263 | Citrate lyase subunit alpha / citrate CoA-transferase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.742 |
SFN53515.1 | SFN84950.1 | SAMN04488056_101212 | SAMN04488056_102196 | Citrate lyase subunit alpha / citrate CoA-transferase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.403 |
SFN53515.1 | dapA | SAMN04488056_101212 | SAMN04488056_11371 | Citrate lyase subunit alpha / citrate CoA-transferase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.742 |
SFN80271.1 | SFN53515.1 | SAMN04488056_10263 | SAMN04488056_101212 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Citrate lyase subunit alpha / citrate CoA-transferase. | 0.742 |
SFN80271.1 | SFN84571.1 | SAMN04488056_10263 | SAMN04488056_102186 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.802 |
SFN80271.1 | SFN84950.1 | SAMN04488056_10263 | SAMN04488056_102196 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.744 |
SFN80271.1 | SFO75521.1 | SAMN04488056_10263 | SAMN04488056_11257 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Homoserine dehydrogenase. | 0.718 |
SFN80271.1 | asd | SAMN04488056_10263 | SAMN04488056_111128 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.820 |
SFN80271.1 | dapA | SAMN04488056_10263 | SAMN04488056_11371 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.799 |
SFN80271.1 | dapB | SAMN04488056_10263 | SAMN04488056_10583 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.931 |
SFN80271.1 | lysA | SAMN04488056_10263 | SAMN04488056_10972 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.509 |
SFN84571.1 | SFN80271.1 | SAMN04488056_102186 | SAMN04488056_10263 | 4Fe-4S single cluster domain of Ferredoxin I. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.802 |
SFN84571.1 | SFN84950.1 | SAMN04488056_102186 | SAMN04488056_102196 | 4Fe-4S single cluster domain of Ferredoxin I. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SFN84571.1 | SFO75521.1 | SAMN04488056_102186 | SAMN04488056_11257 | 4Fe-4S single cluster domain of Ferredoxin I. | Homoserine dehydrogenase. | 0.664 |
SFN84571.1 | asd | SAMN04488056_102186 | SAMN04488056_111128 | 4Fe-4S single cluster domain of Ferredoxin I. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.728 |
SFN84571.1 | dapA | SAMN04488056_102186 | SAMN04488056_11371 | 4Fe-4S single cluster domain of Ferredoxin I. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.760 |
SFN84950.1 | SFN53515.1 | SAMN04488056_102196 | SAMN04488056_101212 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Citrate lyase subunit alpha / citrate CoA-transferase. | 0.403 |
SFN84950.1 | SFN80271.1 | SAMN04488056_102196 | SAMN04488056_10263 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.744 |
SFN84950.1 | SFN84571.1 | SAMN04488056_102196 | SAMN04488056_102186 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.999 |
SFN84950.1 | SFO75521.1 | SAMN04488056_102196 | SAMN04488056_11257 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Homoserine dehydrogenase. | 0.615 |
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