STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO81178.1Formate/nitrite transporter FocA, FNT family. (280 aa)    
Predicted Functional Partners:
SFO71536.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.875
SFO43664.1
Protein of unknown function.
  
     0.657
SFO37728.1
Diacylglycerol kinase family enzyme.
 
  
 0.577
SFO81197.1
Hypothetical protein.
       0.565
SFN48507.1
cation:H+ antiporter.
  
     0.520
SFN52540.1
Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.517
SFN47994.1
Tetrathionate reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.517
SFO75426.1
Glutamate synthase (NADPH/NADH) large chain.
   
  
 0.507
SFO43627.1
Uncharacterized conserved protein.
 
     0.479
SFO60831.1
Ferredoxin hydrogenase gamma subunit.
  
  
 0.474
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.