STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO84394.1Subtilase family protein. (388 aa)    
Predicted Functional Partners:
SFO84347.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.870
SFO46162.1
Octaheme c-type cytochrome, tetrathionate reductase family.
   
 0.806
SFO46232.1
Octaheme c-type cytochrome, tetrathionate reductase family.
   
 0.806
SFO84367.1
Hypothetical protein.
     
 0.804
SFO74781.1
Ca2+-binding protein, RTX toxin-related.
  
 0.767
SFN83721.1
Chemotaxis protein MotC.
  
 0.747
SFO45155.1
Hypothetical protein.
  
 0.747
SFO78049.1
Carbohydrate binding domain-containing protein.
  
 0.747
SFP09055.1
Hypothetical protein.
  
 0.747
SFP15057.1
Hypothetical protein.
  
 0.747
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.