STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO86327.1Hypothetical protein. (2412 aa)    
Predicted Functional Partners:
SFO86244.1
Hypothetical protein.
       0.773
SFO86271.1
Peptidase family M48.
       0.773
SFO86300.1
Hypothetical protein.
       0.773
SFO86359.1
Hypothetical protein.
       0.773
SFO86384.1
Hypothetical protein.
       0.773
SFO86410.1
Hypothetical protein.
       0.773
SFO86433.1
Hypothetical protein.
       0.773
SFO86462.1
AAA domain (dynein-related subfamily).
       0.773
SFO86482.1
Hypothetical protein.
       0.671
SFO86507.1
Von Willebrand factor type A domain-containing protein.
       0.671
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.