STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO90113.1Hypothetical protein. (661 aa)    
Predicted Functional Partners:
SFO84804.1
Hypothetical protein.
   
 
 0.818
SFN96309.1
Na+/proline symporter.
    
 0.781
SFO85012.1
Serine/threonine protein phosphatase Stp1.
  
 0.777
SFO51750.1
Two-component system, chemotaxis family, sensor kinase CheA.
    
 0.768
SFN78540.1
Two-component system, sensor histidine kinase RpfC.
   
 0.750
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.747
SFO39711.1
His Kinase A (phospho-acceptor) domain-containing protein.
    
 0.741
SFO60929.1
Signal transduction histidine kinase.
    
 0.741
SFO84733.1
Type VI secretion protein, EvpB/VC_A0108 family/type VI secretion protein, VC_A0107 family.
  
 
 0.740
SFN87967.1
PAS domain S-box-containing protein.
    
 0.720
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.