STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO93745.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (279 aa)    
Predicted Functional Partners:
SFO93791.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.995
SFP14492.1
Glucose/mannose transport system permease protein.
 0.978
SFO93770.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.976
SFO93715.1
Predicted dehydrogenase.
 
     0.944
SFO93689.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.938
SFO16627.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
  0.873
SFN79423.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
  0.843
SFO55701.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
  0.834
SFO17044.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
  0.786
SFO93816.1
N-acetylmuramic acid 6-phosphate etherase.
 
     0.783
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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