Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFN48537.1 | SFN58037.1 | SAMN04488056_10161 | SAMN04488056_101370 | Aromatic-amino-acid transaminase. | Anthranilate synthase, component I. | 0.712 |
| SFN48537.1 | SFN62926.1 | SAMN04488056_10161 | SAMN04488056_101524 | Aromatic-amino-acid transaminase. | Indolepyruvate decarboxylase. | 0.685 |
| SFN48537.1 | SFN93138.1 | SAMN04488056_10161 | SAMN04488056_102440 | Aromatic-amino-acid transaminase. | Prephenate dehydratase. | 0.875 |
| SFN48537.1 | SFO64953.1 | SAMN04488056_10161 | SAMN04488056_11028 | Aromatic-amino-acid transaminase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.775 |
| SFN48537.1 | SFO92707.1 | SAMN04488056_10161 | SAMN04488056_1164 | Aromatic-amino-acid transaminase. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.509 |
| SFN58037.1 | SFN48537.1 | SAMN04488056_101370 | SAMN04488056_10161 | Anthranilate synthase, component I. | Aromatic-amino-acid transaminase. | 0.712 |
| SFN58037.1 | SFN93138.1 | SAMN04488056_101370 | SAMN04488056_102440 | Anthranilate synthase, component I. | Prephenate dehydratase. | 0.856 |
| SFN58037.1 | SFO92707.1 | SAMN04488056_101370 | SAMN04488056_1164 | Anthranilate synthase, component I. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.713 |
| SFN58037.1 | aroC | SAMN04488056_101370 | SAMN04488056_103108 | Anthranilate synthase, component I. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.920 |
| SFN58037.1 | trpA | SAMN04488056_101370 | SAMN04488056_102352 | Anthranilate synthase, component I. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.978 |
| SFN62926.1 | SFN48537.1 | SAMN04488056_101524 | SAMN04488056_10161 | Indolepyruvate decarboxylase. | Aromatic-amino-acid transaminase. | 0.685 |
| SFN62926.1 | SFO92707.1 | SAMN04488056_101524 | SAMN04488056_1164 | Indolepyruvate decarboxylase. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.517 |
| SFN93138.1 | SFN48537.1 | SAMN04488056_102440 | SAMN04488056_10161 | Prephenate dehydratase. | Aromatic-amino-acid transaminase. | 0.875 |
| SFN93138.1 | SFN58037.1 | SAMN04488056_102440 | SAMN04488056_101370 | Prephenate dehydratase. | Anthranilate synthase, component I. | 0.856 |
| SFN93138.1 | SFO92707.1 | SAMN04488056_102440 | SAMN04488056_1164 | Prephenate dehydratase. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.444 |
| SFN93138.1 | aroC | SAMN04488056_102440 | SAMN04488056_103108 | Prephenate dehydratase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.849 |
| SFN93138.1 | trpA | SAMN04488056_102440 | SAMN04488056_102352 | Prephenate dehydratase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.484 |
| SFO31488.1 | SFO92707.1 | SAMN04488056_104373 | SAMN04488056_1164 | Pyridoxine kinase; Belongs to the pyridoxine kinase family. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.466 |
| SFO64953.1 | SFN48537.1 | SAMN04488056_11028 | SAMN04488056_10161 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aromatic-amino-acid transaminase. | 0.775 |
| SFO64953.1 | SFO92707.1 | SAMN04488056_11028 | SAMN04488056_1164 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.453 |
page 1 of 2