STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO98053.1Multidrug resistance efflux pump. (374 aa)    
Predicted Functional Partners:
SFO98088.1
Hypothetical protein.
 
 0.970
SFO47170.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.932
SFO17188.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.887
SFN87197.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
 
 0.875
SFO47226.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
 
 0.875
SFN78476.1
Outer membrane protein.
 
 0.812
SFO98119.1
MarR family transcriptional regulator, transcriptional regulator for hemolysin.
 
     0.800
SFO57390.1
Outer membrane protein.
  
 0.783
SFN78387.1
ABC transporter.
  
 0.704
SFN78417.1
ATP-binding cassette, subfamily C, LapB.
  
 0.704
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.