Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFN84328.1 | SFP01380.1 | SAMN04488056_102180 | SAMN04488056_11838 | Flagellar motor switch protein FliM. | Hydrogenase expression/formation protein HypC. | 0.661 |
| SFN84328.1 | fliE | SAMN04488056_102180 | SAMN04488056_102149 | Flagellar motor switch protein FliM. | Flagellar hook-basal body complex protein FliE. | 0.968 |
| SFN84328.1 | fliE-2 | SAMN04488056_102180 | SAMN04488056_110140 | Flagellar motor switch protein FliM. | Flagellar hook-basal body complex protein FliE. | 0.911 |
| SFO66465.1 | SFP01380.1 | SAMN04488056_110132 | SAMN04488056_11838 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hydrogenase expression/formation protein HypC. | 0.661 |
| SFO66465.1 | fliE | SAMN04488056_110132 | SAMN04488056_102149 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar hook-basal body complex protein FliE. | 0.892 |
| SFO66465.1 | fliE-2 | SAMN04488056_110132 | SAMN04488056_110140 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar hook-basal body complex protein FliE. | 0.973 |
| SFP01328.1 | SFP01352.1 | SAMN04488056_11836 | SAMN04488056_11837 | Hydrogenase nickel incorporation protein HypB. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.934 |
| SFP01328.1 | SFP01380.1 | SAMN04488056_11836 | SAMN04488056_11838 | Hydrogenase nickel incorporation protein HypB. | Hydrogenase expression/formation protein HypC. | 0.986 |
| SFP01328.1 | SFP01403.1 | SAMN04488056_11836 | SAMN04488056_11839 | Hydrogenase nickel incorporation protein HypB. | Hydrogenase maturation protein HypD; Belongs to the HypD family. | 0.987 |
| SFP01328.1 | SFP01430.1 | SAMN04488056_11836 | SAMN04488056_11840 | Hydrogenase nickel incorporation protein HypB. | Hydrogenase expression/formation protein HypE. | 0.922 |
| SFP01328.1 | hypA | SAMN04488056_11836 | SAMN04488056_11818 | Hydrogenase nickel incorporation protein HypB. | Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.971 |
| SFP01352.1 | SFP01328.1 | SAMN04488056_11837 | SAMN04488056_11836 | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase nickel incorporation protein HypB. | 0.934 |
| SFP01352.1 | SFP01380.1 | SAMN04488056_11837 | SAMN04488056_11838 | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase expression/formation protein HypC. | 0.958 |
| SFP01352.1 | SFP01403.1 | SAMN04488056_11837 | SAMN04488056_11839 | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase maturation protein HypD; Belongs to the HypD family. | 0.960 |
| SFP01352.1 | SFP01430.1 | SAMN04488056_11837 | SAMN04488056_11840 | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase expression/formation protein HypE. | 0.995 |
| SFP01352.1 | hypA | SAMN04488056_11837 | SAMN04488056_11818 | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.874 |
| SFP01380.1 | SFN84328.1 | SAMN04488056_11838 | SAMN04488056_102180 | Hydrogenase expression/formation protein HypC. | Flagellar motor switch protein FliM. | 0.661 |
| SFP01380.1 | SFO66465.1 | SAMN04488056_11838 | SAMN04488056_110132 | Hydrogenase expression/formation protein HypC. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.661 |
| SFP01380.1 | SFP01328.1 | SAMN04488056_11838 | SAMN04488056_11836 | Hydrogenase expression/formation protein HypC. | Hydrogenase nickel incorporation protein HypB. | 0.986 |
| SFP01380.1 | SFP01352.1 | SAMN04488056_11838 | SAMN04488056_11837 | Hydrogenase expression/formation protein HypC. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.958 |
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