Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFO47316.1 | SFP08298.1 | SAMN04488056_106224 | SAMN04488056_12119 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | 0.699 |
| SFO47316.1 | atpA | SAMN04488056_106224 | SAMN04488056_111158 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.989 |
| SFO47316.1 | atpC | SAMN04488056_106224 | SAMN04488056_111161 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.983 |
| SFO47316.1 | atpD | SAMN04488056_106224 | SAMN04488056_111160 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.970 |
| SFO47316.1 | atpE | SAMN04488056_106224 | SAMN04488056_10362 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.889 |
| SFO47316.1 | atpG | SAMN04488056_106224 | SAMN04488056_111159 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.978 |
| SFO47316.1 | atpH | SAMN04488056_106224 | SAMN04488056_111157 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.978 |
| SFP08298.1 | SFO47316.1 | SAMN04488056_12119 | SAMN04488056_106224 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.699 |
| SFP08298.1 | atpA | SAMN04488056_12119 | SAMN04488056_111158 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.739 |
| SFP08298.1 | atpC | SAMN04488056_12119 | SAMN04488056_111161 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.730 |
| SFP08298.1 | atpD | SAMN04488056_12119 | SAMN04488056_111160 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.730 |
| SFP08298.1 | atpE | SAMN04488056_12119 | SAMN04488056_10362 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.775 |
| SFP08298.1 | atpG | SAMN04488056_12119 | SAMN04488056_111159 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.740 |
| SFP08298.1 | atpH | SAMN04488056_12119 | SAMN04488056_111157 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.761 |
| SFP08298.1 | glyA | SAMN04488056_12119 | SAMN04488056_101680 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.647 |
| SFP08298.1 | plsX | SAMN04488056_12119 | SAMN04488056_101691 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.729 |
| SFP08298.1 | prfA | SAMN04488056_12119 | SAMN04488056_12523 | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.986 |
| atpA | SFO47316.1 | SAMN04488056_111158 | SAMN04488056_106224 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.989 |
| atpA | SFP08298.1 | SAMN04488056_111158 | SAMN04488056_12119 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily. | 0.739 |
| atpA | atpC | SAMN04488056_111158 | SAMN04488056_111161 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
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