STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP09055.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
SFP15057.1
Hypothetical protein.
 
      0.895
SFO88435.1
LVIVD repeat-containing protein.
  
 0.887
SFP08976.1
ComB9 competence protein.
       0.777
SFP09021.1
Type IV secretion system protein VirB10.
       0.777
SFO71263.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.770
SFP08945.1
VirB8 protein.
       0.769
SFN90999.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.766
SFO63165.1
Acyl transferase domain-containing protein.
  
 
 0.752
SFO80068.1
Subtilase family protein.
  
 0.747
SFO84394.1
Subtilase family protein.
  
 0.747
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.