Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO45022.1 | SFP11015.1 | SAMN04488056_106113 | SAMN04488056_12229 | Phage protein U. | Site-specific DNA recombinase. | 0.743 |
SFO56824.1 | SFP11015.1 | SAMN04488056_108111 | SAMN04488056_12229 | Cytochrome c-type biogenesis protein. | Site-specific DNA recombinase. | 0.404 |
SFP07909.1 | SFP11015.1 | SAMN04488056_1218 | SAMN04488056_12229 | Transposase. | Site-specific DNA recombinase. | 0.414 |
SFP10879.1 | SFP10968.1 | SAMN04488056_12227 | SAMN04488056_12228 | Hypothetical protein. | Hypothetical protein. | 0.526 |
SFP10879.1 | SFP11015.1 | SAMN04488056_12227 | SAMN04488056_12229 | Hypothetical protein. | Site-specific DNA recombinase. | 0.526 |
SFP10968.1 | SFP10879.1 | SAMN04488056_12228 | SAMN04488056_12227 | Hypothetical protein. | Hypothetical protein. | 0.526 |
SFP10968.1 | SFP11015.1 | SAMN04488056_12228 | SAMN04488056_12229 | Hypothetical protein. | Site-specific DNA recombinase. | 0.773 |
SFP11015.1 | SFO45022.1 | SAMN04488056_12229 | SAMN04488056_106113 | Site-specific DNA recombinase. | Phage protein U. | 0.743 |
SFP11015.1 | SFO56824.1 | SAMN04488056_12229 | SAMN04488056_108111 | Site-specific DNA recombinase. | Cytochrome c-type biogenesis protein. | 0.404 |
SFP11015.1 | SFP07909.1 | SAMN04488056_12229 | SAMN04488056_1218 | Site-specific DNA recombinase. | Transposase. | 0.414 |
SFP11015.1 | SFP10879.1 | SAMN04488056_12229 | SAMN04488056_12227 | Site-specific DNA recombinase. | Hypothetical protein. | 0.526 |
SFP11015.1 | SFP10968.1 | SAMN04488056_12229 | SAMN04488056_12228 | Site-specific DNA recombinase. | Hypothetical protein. | 0.773 |