STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE47002.1Response regulator receiver domain-containing protein. (168 aa)    
Predicted Functional Partners:
SFF48402.1
PAS domain S-box-containing protein.
 
 0.993
SFE95945.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
  
 0.987
SFF10591.1
PAS domain S-box-containing protein.
  
 0.979
SFF56772.1
Hypothetical protein/two-component system, unclassified family, sensor histidine kinase and response regulator.
 
 0.979
SFF65771.1
PAS domain S-box-containing protein.
  
 0.979
SFE91580.1
Signal transduction histidine kinase.
  
 0.976
SFF28967.1
PAS domain S-box-containing protein.
  
 0.948
SFF73021.1
PAS domain S-box-containing protein.
  
 0.947
SFF30941.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 0.935
SFF79482.1
NADH-quinone oxidoreductase subunit F.
   
 
 0.927
Your Current Organism:
Sunxiuqinia elliptica
NCBI taxonomy Id: 655355
Other names: Bacteroidetes bacterium DQHS-15, Bacteroidetes bacterium DQHS-4, Bacteroidetes bacterium DQHS-8, CGMCC 1.9156, LMG 25367, LMG:25367, NCCB 100301, S. elliptica, Sunxiuqinia elliptica Qu et al. 2011, strain DQHS4
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