STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE54528.1Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (344 aa)    
Predicted Functional Partners:
SFE52987.1
Osomolarity two-component system, sensor histidine kinase NIK1.
 0.997
SFE54572.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.979
SFE48437.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 0.970
SFF38678.1
Hypothetical protein.
 0.959
SFE59552.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.953
SFF80112.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 0.950
SFE95945.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
 
0.948
SFF10591.1
PAS domain S-box-containing protein.
 
0.947
SFF48402.1
PAS domain S-box-containing protein.
 
0.946
SFF56772.1
Hypothetical protein/two-component system, unclassified family, sensor histidine kinase and response regulator.
 
0.940
Your Current Organism:
Sunxiuqinia elliptica
NCBI taxonomy Id: 655355
Other names: Bacteroidetes bacterium DQHS-15, Bacteroidetes bacterium DQHS-4, Bacteroidetes bacterium DQHS-8, CGMCC 1.9156, LMG 25367, LMG:25367, NCCB 100301, S. elliptica, Sunxiuqinia elliptica Qu et al. 2011, strain DQHS4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.