STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF18201.1Predicted dehydrogenase. (531 aa)    
Predicted Functional Partners:
SFF18176.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.939
SFF18251.1
Succinyl-diaminopimelate desuccinylase.
  
    0.768
SFF56476.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.764
SFF18226.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
       0.762
SFF56171.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.762
SFE76179.1
Protein of unknown function.
 
     0.755
SFF18081.1
Zinc carboxypeptidase.
       0.731
SFF18153.1
Tetratricopeptide repeat-containing protein.
       0.731
SFE45763.1
Protein of unknown function.
 
    0.706
SFF71842.1
Protein of unknown function.
 
    0.702
Your Current Organism:
Sunxiuqinia elliptica
NCBI taxonomy Id: 655355
Other names: Bacteroidetes bacterium DQHS-15, Bacteroidetes bacterium DQHS-4, Bacteroidetes bacterium DQHS-8, CGMCC 1.9156, LMG 25367, LMG:25367, NCCB 100301, S. elliptica, Sunxiuqinia elliptica Qu et al. 2011, strain DQHS4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.