STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF43543.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (291 aa)    
Predicted Functional Partners:
SFF79482.1
NADH-quinone oxidoreductase subunit F.
  
 0.999
SFE96811.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 
 0.926
SFE57298.1
Acyl carrier protein.
   
 0.867
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.867
SFE65585.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.848
SFE73188.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.848
SFF31260.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.845
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.844
SFF87869.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
   
 0.844
SFF72789.1
NADP-reducing hydrogenase subunit HndC.
   
 0.830
Your Current Organism:
Sunxiuqinia elliptica
NCBI taxonomy Id: 655355
Other names: Bacteroidetes bacterium DQHS-15, Bacteroidetes bacterium DQHS-4, Bacteroidetes bacterium DQHS-8, CGMCC 1.9156, LMG 25367, LMG:25367, NCCB 100301, S. elliptica, Sunxiuqinia elliptica Qu et al. 2011, strain DQHS4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.