node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF41922.1 | SFF41939.1 | SAMN05216283_10655 | SAMN05216283_10656 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | ATP-binding cassette, subfamily F, member 3. | 0.802 |
SFF41922.1 | rplM | SAMN05216283_10655 | SAMN05216283_101206 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.773 |
SFF41922.1 | rplT | SAMN05216283_10655 | SAMN05216283_10689 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.549 |
SFF41922.1 | rplU | SAMN05216283_10655 | SAMN05216283_102403 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.748 |
SFF41939.1 | SFF41922.1 | SAMN05216283_10656 | SAMN05216283_10655 | ATP-binding cassette, subfamily F, member 3. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.802 |
SFF41939.1 | rplD | SAMN05216283_10656 | SAMN05216283_102481 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.766 |
SFF41939.1 | rplM | SAMN05216283_10656 | SAMN05216283_101206 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.758 |
SFF41939.1 | rplR | SAMN05216283_10656 | SAMN05216283_102496 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.777 |
SFF41939.1 | rplT | SAMN05216283_10656 | SAMN05216283_10689 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.759 |
SFF41939.1 | rplU | SAMN05216283_10656 | SAMN05216283_102403 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.760 |
SFF41939.1 | rplW | SAMN05216283_10656 | SAMN05216283_102482 | ATP-binding cassette, subfamily F, member 3. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.777 |
SFF41939.1 | rpsC | SAMN05216283_10656 | SAMN05216283_102486 | ATP-binding cassette, subfamily F, member 3. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.757 |
SFF41939.1 | rpsO | SAMN05216283_10656 | SAMN05216283_101675 | ATP-binding cassette, subfamily F, member 3. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.757 |
SFF41939.1 | rpsP | SAMN05216283_10656 | SAMN05216283_101586 | ATP-binding cassette, subfamily F, member 3. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.782 |
rplD | SFF41939.1 | SAMN05216283_102481 | SAMN05216283_10656 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | ATP-binding cassette, subfamily F, member 3. | 0.766 |
rplD | rplM | SAMN05216283_102481 | SAMN05216283_101206 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplD | rplR | SAMN05216283_102481 | SAMN05216283_102496 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplD | rplT | SAMN05216283_102481 | SAMN05216283_10689 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplD | rplU | SAMN05216283_102481 | SAMN05216283_102403 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplD | rplW | SAMN05216283_102481 | SAMN05216283_102482 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |