STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF88399.1PepSY-associated TM region. (509 aa)    
Predicted Functional Partners:
SFF02202.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.720
SFF85093.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.713
SFF90082.1
Hypothetical protein.
  
     0.702
SFF88342.1
ResB-like family protein.
 
     0.700
SFE61198.1
Tetratricopeptide repeat-containing protein.
  
     0.675
SFF04081.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.648
SFF62639.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.645
SFF42030.1
Hypothetical protein.
  
     0.644
SFF48807.1
Hypothetical protein.
  
     0.640
SFE51932.1
SusE outer membrane protein.
  
    0.635
Your Current Organism:
Sunxiuqinia elliptica
NCBI taxonomy Id: 655355
Other names: Bacteroidetes bacterium DQHS-15, Bacteroidetes bacterium DQHS-4, Bacteroidetes bacterium DQHS-8, CGMCC 1.9156, LMG 25367, LMG:25367, NCCB 100301, S. elliptica, Sunxiuqinia elliptica Qu et al. 2011, strain DQHS4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.