STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0042Conserved hypothetical protein. (559 aa)    
Predicted Functional Partners:
ZPR_0041
Conserved hypothetical protein.
       0.800
ZPR_0040
M23 family peptidase.
  
    0.757
ZPR_3044
Conserved hypothetical protein.
  
     0.608
ZPR_0043
dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein.
  
    0.600
ZPR_0044
TuaG-like glycosyl transferase.
       0.578
ZPR_0811
Conserved hypothetical protein.
  
     0.502
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
    0.490
ZPR_0846
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
  
   
 0.476
ZPR_0339
Conserved hypothetical protein; Belongs to the ArsC family.
 
 
   0.473
ZPR_0320
Aerotolerance-related protein BatC.
  
 
   0.452
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.