STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0055Membrane protein. (466 aa)    
Predicted Functional Partners:
ZPR_0056
ABC-type transporter ATP-binding protein.
 
     0.912
ZPR_2699
Conserved hypothetical protein.
  
     0.729
ZPR_0054
Membrane protein.
 
     0.698
ZPR_4550
Acid protease.
  
     0.627
ZPR_2349
Polysaccharide biosynthesis protein.
  
     0.626
ZPR_3601
Secreted protein.
  
     0.609
ZPR_2085
Secreted protein.
  
     0.587
ZPR_2424
Membrane protein.
  
     0.546
ZPR_0052
Transcriptional regulator PadR-like protein.
 
     0.544
ZPR_0418
HI0933-like protein.
 
     0.543
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.