STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0131Thioredoxin-like subdomain protein. (163 aa)    
Predicted Functional Partners:
ZPR_1570
TonB-dependent outer membrane receptor.
 
     0.731
ZPR_0132
Metallophosphoesterase domain-containing protein.
       0.693
ZPR_1857
Membrane protein.
  
 
 0.628
ZPR_0133
Rhodanese-like domain protein.
       0.565
ZPR_0409
Conserved hypothetical protein.
 
 
 0.538
ZPR_1876
Peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
   
 
 0.529
ZPR_1877
Peptide methionine sulfoxide reductase.
   
 
 0.529
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.524
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.524
ZPR_0135
6-pyruvoyl tetrahydropterin synthase.
       0.459
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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