Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZPR_0133Rhodanese-like domain protein. (125 aa)    
Predicted Functional Partners:
ZPR_0135
6-pyruvoyl tetrahydropterin synthase.
       0.623
ZPR_0840
Conserved hypothetical rhodanese-domain protein.
  
     0.621
ZPR_0132
Metallophosphoesterase domain-containing protein.
       0.620
ZPR_1794
Metallo-beta-lactamase superfamily protein.
 
 
 0.568
ZPR_0131
Thioredoxin-like subdomain protein.
       0.564
ZPR_0134
Hypothetical protein.
       0.469
ZPR_1996
Metallo-beta-lactamase/rhodanese-like domain-containing protein.
 
 
 0.442
ybeY
Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.435
ZPR_1798
Rhodanese-like protein.
  
     0.426
ZPR_1810
Rhodanese-like protein.
 
 
 0.409
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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