Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_0189Homogentisate 1,2-dioxygenase. (389 aa)    
Predicted Functional Partners:
ZPR_0190
4-hydroxyphenylpyruvate dioxygenase.
 
 0.998
ZPR_1218
Fumarylacetoacetase.
  
 0.937
ZPR_0791
Phenylalanine 4-monooxygenase.
 
  
 0.855
ZPR_4449
Flavin reductase like protein.
 
     0.694
ZPR_1238
Putative hydrolase.
  
  
 0.649
ZPR_4369
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase.
  
  
 0.649
ZPR_2586
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.612
ZPR_0192
Tryptophan 2,3-dioxygenase.
 
  
 0.603
ZPR_0188
Luciferase-like monooxygenase family protein.
     
 0.559
ZPR_0863
hydroxymethylglutaryl-CoA lyase-like protein.
 
   
 0.423
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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