Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ZPR_01904-hydroxyphenylpyruvate dioxygenase. (380 aa)    
Predicted Functional Partners:
ZPR_0189
Homogentisate 1,2-dioxygenase.
 
 0.998
ZPR_1382
D-amino acid dehydrogenase.
   
 
 0.915
hisC
ATP phosphoribosyltransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.915
ZPR_2626
Histidinol-phosphate aminotransferase.
    
 0.915
ZPR_0939
Aspartate aminotransferase.
   
 
 0.914
ZPR_3742
Aspartate aminotransferase.
   
 
 0.914
ZPR_1250
Aminotransferase, class IV.
   
 
 0.902
ZPR_1218
Fumarylacetoacetase.
 
  
 0.859
ZPR_1245
glutamyl-tRNA(Gln) amidotransferase subunit A.
  
 
  0.825
ZPR_0791
Phenylalanine 4-monooxygenase.
 
  
 0.736
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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