STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0191Conserved hypothetical protein. (258 aa)    
Predicted Functional Partners:
ZPR_0192
Tryptophan 2,3-dioxygenase.
   
   0.841
ZPR_0193
M23 family peptidase.
       0.776
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
    0.668
ZPR_0618
Surface antigen D15 family outer membrane protein.
  
     0.645
ZPR_0132
Metallophosphoesterase domain-containing protein.
  
   
 0.586
ZPR_0523
Membrane protein.
  
     0.572
ZPR_0477
Conserved hypothetical protein.
 
    0.565
lpxC
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
   
 0.565
ZPR_0644
PpiC-type secreted peptidyl-prolyl cis-trans isomerase.
 
    0.540
ZPR_4208
Prenyltransferase family protein.
 
     0.511
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.