Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_0209Protein containing fe-S metabolism associated domain. (142 aa)    
Predicted Functional Partners:
ZPR_0211
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.995
ZPR_0208
Conserved hypothetical protein.
   
 0.960
ZPR_0212
FeS assembly protein SufD.
 
 
 0.923
ZPR_0213
FeS assembly ATPase SufC.
 
 
 0.913
ZPR_0215
Cysteine desulfurase activator complex subunit SufB.
 
 
 0.889
ZPR_0344
Cysteine desulfurase-like protein.
 
 0.853
ZPR_0207
Conserved hypothetical protein.
       0.822
ZPR_0210
Protein containing META domain.
       0.781
ZPR_0393
Aminotransferase, class V.
 
 
 0.731
ZPR_0206
Conserved hypothetical protein.
       0.725
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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